there are set of reads in the files but that has nothing to do with the output because with those I have created p.txt.
The output I want is like:
gene NC_002755.fq NC_009525.fq NC_009565.fq NC_012943.fq N
+C_016768.fq NC_016934.fq NC_017026.fq NC_017522.fq NC_017
+523.fq NC_017524.fq NC_017528.fq NC_018078.fq NC_018143.f
+q NC_020089.fq NC_020559.fq NC_021054.fq NC_021192.fq
+NC_021193.fq NC_021194.fq NC_021251.fq NC_021740.fq NC_02
+2350.fq
(3R)-hydroxyacyl-ACP dehydratase subunit HadA 0 0 0 0 0
+ 0 0 0 0 0 0 0 0 0 0 0 1 0
+0 0 0 0
(3R)-hydroxyacyl-ACP dehydratase subunit HadB 0 0 0 0 0
+ 0 1 0 0 0 0 0 0 0 0 0 0 0
+0 0 0 0
(dimethylallyl)adenosine tRNA methylthiotransferase 1 1 1
+0 0 1 0 0 0 0 0 0 0 0 0 0 0
+ 0 0 0 0
the result should print 1 if the filename matches else print 0
-
Are you posting in the right place? Check out Where do I post X? to know for sure.
-
Posts may use any of the Perl Monks Approved HTML tags. Currently these include the following:
<code> <a> <b> <big>
<blockquote> <br /> <dd>
<dl> <dt> <em> <font>
<h1> <h2> <h3> <h4>
<h5> <h6> <hr /> <i>
<li> <nbsp> <ol> <p>
<small> <strike> <strong>
<sub> <sup> <table>
<td> <th> <tr> <tt>
<u> <ul>
-
Snippets of code should be wrapped in
<code> tags not
<pre> tags. In fact, <pre>
tags should generally be avoided. If they must
be used, extreme care should be
taken to ensure that their contents do not
have long lines (<70 chars), in order to prevent
horizontal scrolling (and possible janitor
intervention).
-
Want more info? How to link
or How to display code and escape characters
are good places to start.
|