Perl: the Markov chain saw | |
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Re: Comparing strings (exact matches) in LARGE numbers FASTby snoopy (Curate) |
on Aug 29, 2008 at 00:06 UTC ( [id://707640]=note: print w/replies, xml ) | Need Help?? |
>> Note: the strings are made of only letters. More exactly, 4 letters - nucleotide bases (A,C,G,T). Is this related genome matching, sequencing etc? If you haven't already, check out the wide range of resources available from bioperl. There's lots of interesting reading, algorithms and freely available Perl code.
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