Here is a first list of the modules that are the most frequently listed as prereqs in META.yml (which is about a third of the distributions present on the CPAN). Dirty scripts which produced this are available on demand.
87 DBI
63 URI
63 Kwiki
58 Params::Validate
56 Template
56 DateTime
55 LWP::UserAgent
52 POE
46 YAML
41 WWW::Mechanize
40 Class::Accessor
34 LWP
33 XML::LibXML
32 Class::DBI
32 URI::Escape
28 Error
28 HTML::Parser
27 Compress::Zlib
25 mod_perl
25 Parse::RecDescent
24 LWP::Simple
24 Test::Exception
24 Date::Parse
24 XML::Parser
24 Time::Piece
23 Tk
22 Email::Simple
22 HTTP::Request
22 HTML::Entities
22 HTML::Mason
21 File::Find::Rule
21 Test::Pod
20 IO::Scalar
20 Apache::Request
20 Digest::SHA1
20 Clone
19 CGI::Application
18 IO::Zlib
18 File::Slurp
17 XML::Simple
17 UNIVERSAL::require
17 Exception::Class
17 GD
16 DBD::SQLite
16 XML::RSS
15 Class::MethodMaker
15 Cache::Cache
15 Pod::Simple
15 Spiffy
15 Class::Data::Inheritable
15 XML::SAX
14 Image::Size
14 Maypole
14 Carp::Assert
14 HTML::TokeParser
14 Date::Calc
14 Test::Builder::Tester
13 Class::Accessor::Fast
13 Log::Log4perl
13 Object::props
12 HTML::Template
12 CGI::Session
12 DBD::mysql
12 Inline
12 Log::Dispatch
12 XML::XPath
12 HTTP::Cookies
11 SOAP::Lite
11 HTML::TreeBuilder
11 Email::Address
11 XML::LibXSLT
11 Net::LDAP
11 Tie::IxHash
11 Regexp::Common
11 Win32::OLE
11 Term::ReadKey
11 Archive::Tar
10 Net::DNS
10 IO::String
10 HTTP::Date
10 Module::Build
10 CGI::Builder
10 Apache
10 Date::Manip
10 load
10 CGI::Wiki
10 Archive::Zip
10 Wx
10 Apache::Cookie
10 Image::Magick
9 DateTime::Set
9 Gtk2
9 Class::Accessor::Chained
9 Apache::Test
9 IO::All
9 Algorithm::Diff
9 Mail::Sendmail
9 Test::Pod::Coverage
9 Email::MIME
9 Date::Format
9 Mail::Address
9 Math::Symbolic
8 Class::props
8 Email::Valid
8 HTML::TokeParser::Simple
8 Exporter::Lite
8 Apache::Session
8 MP3::Info
8 Locale::Maketext::Simple
7 Object::groups
7 File::Type
7 GraphViz
7 BerkeleyDB
7 Mail::Internet
7 Config::General
7 URI::URL
7 HTTP::Response
7 HTTP::Status
7 Module::Pluggable
7 Text::Template
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