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Re: Find duplicate based on specific fields while allowing 2 mismatch

by kcott (Archbishop)
on Aug 28, 2017 at 09:17 UTC ( [id://1198139]=note: print w/replies, xml ) Need Help??

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  1. or download this
    #!/usr/bin/env perl

...
chrM:309    1   TCAGGGTG    106
chrM:309    2   TCAGGGTG    130
chrM:309    2   TCAGGGTG    129
  2. or download this
    CLUSTER
chrM:307    1   TCAGGGTG    106
...
chrM:309    0   AGCGGGGA    129
chrM:309    0   AGCGGGGA    130
chrM:309    0   AGCGGGGA    129
  3. or download this
    ... map { ... } sort { ... } map { ... } ...
  4. or download this
    CLUSTER
chrM:307    1    TCAGGGTG    106
...
chrM:309    0    AGCGGGGA    130
chrM:309    0    AGCGGGGA    129
CLUSTER

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