Most likely you are mixing Perl versions and your local Perl and the system Perl have different versions.

This could be caused by having the PERL5LIB environment variable set for example.

Compare the compiler message:

/home/tester/TeMIP-ALB/perl/perl/perl-5.24.3/
[download]

vs. the location of the problematic .so:

/usr/local/bin/perl/lib/5.24.3/
[download]

I would run your C program with a clean environment, and especially empty PERL5LIB (or only the "good" Perl path in it) to make sure that the C program can only find the Perl libraries compiled for it.