Re^2: Can not install PDL::IO::HDF5 in fedora31

1..13 HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0: #000: ../../src/H5Ddeprec.c line 257 in H5Dextend(): unable to extend dataset major: Dataset minor: Unable to initialize object #001: ../../src/H5Dint.c line 2753 in H5D__set_extent(): dataset has contiguous storage major: Invalid arguments to routine minor: Out of range Error extending dataset in PDL::IO::HDF5::Dataset:set at t/attribPDL.t line 33. HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0: #000: ../../src/H5T.c line 1682 in H5Tcopy(): not a datatype major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0: #000: ../../src/H5T.c line 2176 in H5Tset_size(): not a datatype major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0: #000: ../../src/H5Adeprec.c line 135 in H5Acreate1(): not a type major: Invalid arguments to routine minor: Inappropriate type Error in PDL::IO::HDF5::Dataset attrSet; Can't create attribute 'UNITS' at t/attribPDL.t line 36. HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0: #000: ../../src/H5T.c line 1754 in H5Tclose(): not a datatype major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0: #000: ../../src/H5T.c line 1682 in H5Tcopy(): not a datatype major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0: #000: ../../src/H5Adeprec.c line 135 in H5Acreate1(): not a type major: Invalid arguments to routine minor: Inappropriate type Error in PDL::IO::HDF5::Dataset attrSet; Can't create attribute 'NUM_COL' at t/attribPDL.t line 37. HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0: #000: ../../src/H5T.c line 1754 in H5Tclose(): not a datatype major: Invalid arguments to routine minor: Inappropriate type HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0: #000: ../../src/H5T.c line 1793 in H5Tequal(): not a datatype major: Invalid arguments to routine minor: Inappropriate type not ok 1 # Failed test at t/attribPDL.t line 67. HDF5-DIAG: Error detected in HDF5 (1.10.5) thread 0: #000: ../../src/H5Adeprec.c line 202 in H5Aopen_name(): can't open attribute: 'UNITS' major: Attribute minor: Can't open object #001: ../../src/H5Aint.c line 557 in H5A__open_by_name(): unable to load attribute info from object header major: Attribute minor: Unable to initialize object #002: ../../src/H5Oattribute.c line 515 in H5O__attr_open_by_name(): can't locate attribute: 'UNITS' major: Attribute minor: Object not found Error Calling PDL::IO::HDF5::Dataset::attrget: Can't open HDF5 Attribute name 'UNITS'. at t/attribPDL.t line 70. Can't call method "index" on an undefined value at /root/.cpanm/work/1576924508.17628/PDL-IO-HDF5-0.73/blib/lib/PDL/IO/HDF5/Dataset.pm line 1512, <DATA> line 207. # Looks like your test exited with 255 just after 1.

Comment on Re^2: Can not install PDL::IO::HDF5 in fedora31

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Re^3: Can not install PDL::IO::HDF5 in fedora31 by syphilis (Archbishop) on Dec 22, 2019 at 23:12 UTC
I have no idea what the problem is. I suggest opening a new issue about this at https://github.com/PDLPorters/pdl-io-hdf5/issues If that fails to draw a helpful reponse, then raise the issue at https://github.com/PDLPorters/pdl/issues and see how that goes. (I don't know if anyone is actively monitoring the pdl-io-hdf5 issues, but I do know that the pdl issues are being monitored.) Provide the same information as you gave us, including the output of `perl -Mblib t/attribPDL.t` Cheers, Rob	[reply] [d/l]
Re^4: Can not install PDL::IO::HDF5 in fedora31 by etj (Deacon) on Apr 25, 2022 at 10:29 UTC
PDL::IO::HDF5 issues are also being monitored! In fact, issues on any of the PDLverse distros with the GitHub Actions installed create notifications in #pdl on irc.perl.org.	[reply]
Re^4: Can not install PDL::IO::HDF5 in fedora31 by toothedsword (Sexton) on Dec 24, 2019 at 01:26 UTC
OK, Thank you so much! toothedsword	[reply]


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