#!/usr/bin/env perl use strict; use warnings; use Text::CSV_XS "csv"; use DBI; my $csv_file = shift || die "Give a CSV file with sample data\n"; my $dbh = DBI->connect("dbi:SQLite::memory:"); # DB is ":memory:" $dbh->do(<<""); CREATE TABLE sampleData( sample, input, amount ) my $insert_h = $dbh->prepare(<<""); INSERT INTO sampleData VALUES( ?, ?, ? ) csv( in => "test.csv", on_in => sub { my @values = @{ $_[1] }; $insert_h->execute(@values) if @values == 3; }); my $tallies = $dbh->selectall_arrayref(<<""); SELECT sample ,input ,SUM(amount) FROM sampleData GROUP BY sample, input ORDER BY sample, input csv( in => $tallies, out => "outputfile.csv" );